2020 | Haruko Takeyama Laboratory | Biomolecular Engineering Laboratory, Waseda University

PUBLICATIONS

Original paper

[2020]

2020

  1. Shiokawa D., Sakai H., Ohata H., Miyazaki T., Kanda Y., Sekine S., Narushima D., Hosokawa M., Kato M., Suzuki Y., Takeyama H., Kambara H., Nakagama H., Okamoto K. “Slow-cycling cancer stem cells regulate progression and chemoresistance in colon cancer”.Cancer Research, 2020, 80(20), 4451.
  2. Sugeno A., Piao W., Yamazaki M., Takahashi K., Arikawa K., Matsunaga H., Hosokawa M., Tominaga D., Goshima Y., Takeyama H., Ohshima T. “Cortical transcriptome analysis after spinal cord injury reveals the regenerative mechanism of central nervous system in CRMP2 knock-in mice”.Neural Regeneration Research, 2020, 16(7), 1251.
  3. K. Ide, Y. Nishikawa, M. Kogawa, E. Iwamoto, A. Z. Samuel, Y. Nakano and H. Takeyama (2020), “High-Quality Draft Genome Sequence of a Rickettsiales Bacterium Found in Acropora tenuis Coral from Okinawa, Japan”, Microbiology Resource Announcements, 9(48)
  4. Samuel, A. Z., R. Mukojima, S. Horii, M. Ando, S. Egashira, T. Nakashima, M. Iwatsuki and H. Takeyama (2021). “On Selecting a Suitable Spectral Matching Method for Automated Analytical Applications of Raman Spectroscopy”, ACS Omega, in press
  5. H. Takeyama, H. Saito, Y. Nishikawa (2020), “MBC2019: Marine Biotechnology Conference 2019″, Marine Biotechnology, 22(6), 725-726
  6. Horii S., Ando M., Samuel A. Z., Take A., Nakashima T., Matsumoto A., Takahashi Y., Takeyama H., Detection of Penicillin G Produced by Penicillium chrysogenum with Raman Microspectroscopyand Multivariate Curve Resolution-Alternating Least Squares Methods. Journal of Natural Products.

    7. Adoped for Journal Cover.

      Journal cover of Natural Products
  7. Muhammad W. Lewaru, Y. Nishikawa, K. Ide, M. Kogawa, M. Hosokawa, Ashok Z. Samuel, S. Sumimoto, H. Nuryadi, S. Suda, ” Draft Genome Sequence of Okeania sp. Strain KiyG1, Assembled from Single-Amplified Genomes Collected from Cape Kiyan, Okinawa, Japan ” Microbiology Resource Announcement
  8. Hosomi. K., N. Shibata, A. Shimoyama, T. Uto, T. Nagatake, Y. Tojima, T. Nishino, H. Takeyama, K. Fukase, H. Kiyono, J. Kunisawa (2020). ” Lymphoid tissue–resident Alcaligenes establish an intracellular symbiotic environment by creating a unique energy shift in dendritic cells ” Front Microbiol.
  9. Shiokawa, D., H. Sakai, H. Ohata, T. Miyazaki, Y. Kanda, S. Sekine, D. Narushima, M. Hosokawa, M. Kato, Y. Suzuki, H. Takeyama, H. Kambara, H. Nakagama and K. Okamoto (2020). “Slow-cycling cancer stem cells regulate progression and chemoresistance in colon cancer.” Cancer Res.
  10. Inagaki, T., S. Yamada, H. Fujii, T. Yoshikawa, M. Shibamura, S. Harada, S. Fukushi, M. Q. Le, C. T. Nguyen, T. T. T. Nguyen, T. T. Nguyen, V. T. Quach, V. D. Thong, K. Mori, M. Sasaki, A. Setiyono, E. Handharyani,H. Takeyama, F. Hasebe and M. Saijo (2020). “Characterization of a novel alphaherpesvirus isolated from the fruit bat.” J Virol
  11. Tonouchi, K., Y. Adachi, S. Moriyama, K. Sano, K. Tabata, K. Ide, H. Takeyama, T. Suzuki and Y. Takahashi (2020). “Stereotyped B-cell response that counteracts antigenic variation of influenza viruses.” Int Immunol.
  12. Samuel, A. Z., R. Miyaoka, M. Ando, A. Gaebler, C. Thiele and H. Takeyama (2020). “Molecular profiling of lipid droplets inside HuH7 cells with Raman micro-spectroscopy.” Commun Biol 3(1): 372.
  13. Schanz, O., R. Chijiiwa, S. C. Cengiz, Y. Majlesain, H. Weighardt, H. Takeyama and I. Förster (July. 2020). “Dietary AhR Ligands Regulate AhRR Expression in Intestinal Immune Cells and Intestinal Microbiota Composition.” Int J Mol Sci 21(9).
  14. Kataoka, K., R. Minei, K. Ide, A. Ogura, H. Takeyama, M. Takeda, T. Suzuki, K. Yura and T. Asahi (May 2020). “The Draft Genome Dataset of the Asian Cricket.” Front Genet 11: 470.
  15. Yumoto, M., N. Hemmi, N. Sato, Y. Kawashima, K. Arikawa, K. Ide, M. Hosokawa, M. Seo and H. Takeyama (Apr. 2020). “Evaluation of the effects of cell-dispensing using an inkjet-based bioprinter on cell integrity by RNA-seq analysis.” Sci Rep 10(1): 7158.
  16. Yamazaki, M., M. Hosokawa, K. Arikawa, K. Takahashi, C. Sakanashi, T. Yoda, H. Matsunaga and H. Takeyama (Apr. 2020). “Effective microtissue RNA extraction coupled with Smart-seq2 for reproducible and robust spatial transcriptome analysis.” Sci Rep 10(1): 7083.
  17. Schanz, O., R. Chijiiwa, S. C. Cengiz, Y. Majlesain, H. Weighardt, H. Takeyama and I. Föster (Apr. 2020). “Dietary AhR Ligands Regulate AhRR Expression in Intestinal Immune Cells and Intestinal Microbiota Composition.” Int J Mol Sci 21(9).
  18. Tsuyuzaki, H., M. Hosokawa, K. Arikawa, T. Yoda, N. Okada, H. Takeyama and M. Sato (Mar. 2020). “Time-lapse single-cell transcriptomics reveals modulation of histone H3 for dormancy breaking in fission yeast.” Nat Commun 11(1): 1265.
  19. Okamura, Y., N. Morimoto, D. Ikeda, N. Mizusawa, S. Watabe, H. Miyanishi, Y. Saeki, H. Takeyama, T. Aoki,M. Kinoshita, T. Kono, M. Sakai and J. I. Hikima (Mar. 2020). “Interleukin-17A/F1 Deficiency Reduces Antimicrobial Gene Expression and Contributes to Microbiome Alterations in Intestines of Japanese medaka (” Front Immunol 11: 425.
  20. Miyaoka, R., M. Ando, R. Harada, H. Osaka, A. Z. Samuel, M. Hosokawa and H. Takeyama (Feb. 2020). “Rapid inspection method for investigating the heat processing conditions employed for chicken meat using Raman spectroscopy.” J Biosci Bioeng 129(6): 700-705.
  21. Ogawa, M., Takada, N., Shizukuishi, S., Tomokiyo, M., Chang, B., Yoshida, M., … & Takeyama, H. (2020). Streptococcus pneumoniae triggers hierarchical autophagy through reprogramming of LAPosome-like vesicles via NDP52-delocalization. Communications biology, 3(1), 1-15.
  22. Chijiiwa, R., Hosokawa, M., Kogawa, M., Nishikawa, Y., Ide, K., Sakanashi, C., Takahashi, K., Takeyama, H. (2020). Single-cell genomics of uncultured bacteria reveals dietary fiber responders in the mouse gut microbiota. Microbiome 8(1), 5.