- Kogawa M, Nishikawa Y, Saeki T, Yoda T, Arikawa K, Takeyama H and Hosokawa M (2023) Revealing within-species diversity in uncultured human gut bacteria with single-cell long-read sequencing. Microbiol. 14:1133917, doi: 10.3389/fmicb.2023.1133917
- Nguyen TA, Lino C, Hang H, Alves J, Thang B, Shin S, Sugiyama K, Matsunaga H and Takeyama H (2023) Protective role of endothelial fibulin-4 in valvulo-arterial integrity. Am. Heart Assoc. 3;12(1):e026942, doi: 10.1161/jaha.122.026942
- Horii S, Samuel AZ, Nakashima T, Take A, Matsumoto A, Takahashi Y, Ando M and Takeyama H (2023) Mycelial differentiation linked avermectin production in Streptomyces avermitilisstudied with Raman imaging. Appl Microbiol Biotechnol. 107, 369–378, doi: 1007/s00253–022-12314-
- Kusakabe M, Taguchi A, Tanikawa M, Hoshi D, Tsuchimochi S, Qian X, Toyohara Y, Kawata A, Wagatsuma R, Yamaguchi K, Yamamoto Y, Ikemura M, Sone K, Mori-Uchino M, Matsunaga H, Tsuruga T, Nagamatsu, Kukimoto I, Wada-Hiraike O, Kawazu M, Ushiku T, Tameyama H, Oda K, Kawana K ,Hippo Y and Osuga Y (2023) Application of organoid culture from HPV18-positive small cell carcinoma of the uterine cervix for precision medicine. Cancer Med.12, 8476–8489, doi: 10.1002/cam4.5588
- Ide H, Aoshi T, Saito M, Espulgar WV, Brones JC, Hosokawa M, Matsunaga H, Arikawa K, Takeyama H, Koyama S, Takamatsu H and Tamiya E (2023) Linking antigen specific T-cell dynamics in a microfluidic chip to single cell transcription patterns. Biophys. Res. Commun. 657, 8-15, doi: 10.1016/j.bbrc.2023.03.035
- Hosokawa M, Iwai N, Arikawa K, Saeki T, Endoh T, Yoda T, Tsuda S and Takeyama H (2023) Target enrichment of uncultured human oral bacteria with phage-derived molecules found by single-cell genomics. Biosci. Bioeng. 136(1), 58-66, doi: 10.1016/j.jbiosc.2023.04.005
- Arai H, Anbutsu H, Nishikawa Y, Kogawa M, Ishii K, Hosokawa M, Lin SR, Ueda M, Nakai M, Kunimi Y, Harumoto T, Kageyama D, Takeyama H and Inoue MN (2023) Combined actions of bacteriophage-encoded genes in Wolbachia-induced male lethality. iScience. 26(6):106842, doi: 10.1016/j.isci.2023.106842
- Ando M, Sugiyama K, Kubo K, Horii S, Hano T, Tomaru Y and Takeyama H (2023) Single-cell Level Raman Molecular Profiling Reveals the Classification of Growth Phases of Chaetoceros tenuissimus. Phys. Chem. 127, 22, 5027–5033, doi: 10.1021/acs.jpcb.3c02152
- Nishimura M, Takeyama H and Hosokawa M (2023) Enhancing the sensitivity of bacterial single-cell RNA sequencing using RamDA-seq and Cas9-based rRNA depletion. Biosci. Bioeng. 136(2), 152-158, doi: 10.1016/j.jbiosc.2023.05.010.
- Samuel AZ, Sugiyama K and Takeyama H (2023) Direct intracellular detection of biomolecule specific bound-water with Raman spectroscopy. Acta A Mol. Biomol. Spectrosc. 285, 121870, doi: 10.1016/j.saa.2022.121870
- Ng YS, Cheng CS, Ando M, Tseng YT, He ST, Li CY, Cheng SW, Chen YM, Kumar R, Liu CH, Takeyama H, Hirono I, Wang HC (2023) White spot syndrome virus (WSSV) modulates lipid metabolism in white shrimp. Commun Biol. 6(1), 546, doi: 10.1038/s42003-023-04924-w
- Chung J, Sahelijo N, Maruyama T, Hu J, Panitch R, Xia W, Mez J, Stein TD; Alzheimer’s Disease Neuroimaging Initiative; Saykin AJ, Takeyama H, Farrer LA, Crane PK, Nho K, Jun GR (2023) Alzheimer’s disease heterogeneity explained by polygenic risk scores derived from brain transcriptomic profiles. Alzheimers Dement. Online ahead of print. 2023:1-12. doi: 10.1002/alz.13069
- Hosokawa M and Nishikawa Y (2023) Tools for microbial single-cell genomics for obtaining uncultured microbial genomes. Rev. Online ahead of print. doi: 10.1007/s12551-023-01124-y
- Arikawa K and Hosokawa M (2023) Uncultured prokaryotic genomes in the spotlight: An examination of publicly available data from metagenomics and single-cell genomics. Struct. Biotechnol. J. 21:4508-4518. doi: 10.1016/j.csbj.2023.09.010
- Tonouchi K, Adachi Y, Suzuki T, Kuroda D, Nishiyama A, Yumoto K, Takeyama H, Suzuki T, Hashiguchi T, Takahashi Y (2023) Structural basis for cross-group recognition of an influenza virus hemagglutinin antibody that targets postfusion stabilized epitope. PLoS Pathog. 9;19(8). doi: 10.1371/journal.ppat. 1011554